Gerald M. Rubin
Gerald M. Rubin (born 1950) is an American biologist, notable for pioneering the use of transposable P elements in genetics, and for leading the public project to sequence the Drosophila melanogaster genome. Related to his genomics work, Rubin's lab is notable for development of genomics tools and whole-genome studies of gene regulation. Rubin also serves as Vice President of the Howard Hughes Medical Institute and Executive Director of the Janelia Farm Research Campus.[2][3][4]
Biography
Rubin was born in Boston, Massachusetts, in 1950, attending the Boston Latin School. Rubin completed his undergraduate degree in biology at MIT, working at Cold Spring Harbor Laboratory during the summer.[5][6] He completed his Ph.D. at the University of Cambridge, at the MRC in 1974[7], sequencing yeast RNA. He did postdoctoral work at Stanford University with David Hogness[8].
Rubin's first faculty position was at Harvard Medical School, followed by the Carnegie Institution of Washington; in 1983 he accepted a faculty appointment at the University of California, Berkeley. He was appointed a Howard Hughes Medical Investigator in 1987. He is currently the MacArthur Professor of Genetics, Genomics and Development, in Berkeley's Department of Molecular and Cell Biology.
Rubin has taken a leading role in a number of high-profile biology projects. As the director of the Berkeley Drosophila Genome Project, he led the public effort to sequence Drosophila melanogaster.[9] As Vice President of the Howard Hughes Medical Institute, Rubin led the development of HHMI's Janelia Farm Research Campus, an independent biomedical research institute in Virginia.[5][6]
His lab is particularly known for its development of genomics tools, studies of gene regulation, and other genome-wide research.
Selected papers
- Spradling, A.; Rubin, G. (1982). "Transposition of cloned P elements into Drosophila germ line chromosomes". Science 218 (4570): 341–347. Bibcode 1982Sci...218..341S. doi:10.1126/science.6289435. PMID 6289435. edit
- Rubin, G.; Spradling, A. (1982). "Genetic transformation of Drosophila with transposable element vectors". Science 218 (4570): 348–353. Bibcode 1982Sci...218..348R. doi:10.1126/science.6289436. PMID 6289436. edit
- Miklos, G.; Rubin, G. (1996). "The role of the genome project in determining gene function: Insights from model organisms". Cell 86 (4): 521–529. doi:10.1016/S0092-8674(00)80126-9. PMID 8752207. edit
- Adams, M.; Celniker, S.; Holt, R.; Evans, C.; Gocayne, J.; Amanatides, P.; Scherer, S.; Li, P. et al. (2000). "The genome sequence of Drosophila melanogaster". Science 287 (5461): 2185–2195. Bibcode 2000Sci...287.2185.. doi:10.1126/science.287.5461.2185. PMID 10731132. edit
- Rubin, G.; Yandell, M.; Wortman, J.; Gabor Miklos, G.; Nelson, C.; Hariharan, I.; Fortini, M.; Li, P. et al. (2000). "Comparative genomics of the eukaryotes". Science 287 (5461): 2204–2215. Bibcode 2000Sci...287.2204.. doi:10.1126/science.287.5461.2204. PMC 2754258. PMID 10731134. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2754258. edit
- Botstein, D.; Cherry, J. M.; Ashburner, M.; Ball, C. A.; Blake, J. A.; Butler, H.; Davis, A. P.; Dolinski, K. et al. (2000). "Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium". Nature Genetics 25 (1): 25–29. doi:10.1038/75556. PMC 3037419. PMID 10802651. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3037419. edit
- Rubin, G. M. (2001). "The draft sequences: Comparing species". Nature 409 (6822): 820–821. doi:10.1038/35057277. PMID 11236995. edit
- Spellman, P. T.; Rubin, G. M. (2002). "Evidence for large domains of similarly expressed genes in the Drosophila genome". Journal of Biology 1 (1): 5. doi:10.1186/1475-4924-1-5. PMC 117248. PMID 12144710. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=117248. edit
Awards
- 2000 AAAS-Newcomb Cleveland Prize, AAAS (with Craig Venter) for his March 24, 2000, review paper on sequencing the Drosophila geome[10]
- 2003 George W. Beadle Medal (with Allan C. Spradling)[1]
- Helen Hay Whitney Fellow
- Phi Beta Kappa
- Phi Lambda Epsilon
- National Science Foundation, predoctoral Fellow
- United States Churchill Foundation Fellow
- Co-winner, Passano Foundation Young Scientist Award
- American Chemical Society Eli Lilly Award in Biological Chemistry
- Co-winner, National Academy of Sciences U.S. Steel Foundation Award in Molecular Biology
- Genetics Society of America Medal
- Member, National Academy of Sciences
- Fellow, American Association for the Advancement of Science
- Fellow, American Academy of Arts and Sciences
- Fellow, American Academy of Microbiology
- Howard Taylor Ricketts Award from The University of Chicago
- Member, Institute of Medicine
References
- ^ a b Orr-Weaver, T. (2003). "The 2003 George W. Beadle Medal; Gerald M. Rubin and Allan C. Spradling". Genetics 164 (4): 1248–1249. PMC 1462668. PMID 15106662. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1462668. edit
- ^ Rubin, G. M. (2006). "Janelia Farm: An Experiment in Scientific Culture". Cell 125 (2): 209–212. doi:10.1016/j.cell.2006.04.005. PMID 16630805. edit
- ^ http://mcb.berkeley.edu/faculty/GEN/rubing.html Rubin faculty profile]
- ^ http://www.sciencewatch.com/sept-oct99/sw_sept-oct99_page3.htm HMI's Gerald M. Rubin: The Benefits of Genomics, ScienceWatch, v.10, n.5 (Sept./Oct. 1999)
- ^ a b UPI, "Gerald Rubin: Science Far Too Conservative", April 20, 2006 (discussing Janelia Farm).
- ^ a b Tim Studt, "Architect of the Future: Refocusing on Basic Research", R&D Magazine.
- ^ Rubin, G. (1974). "Three forms of the 5.8-S ribosomal RNA species in Saccharomyces cerevisiae". European journal of biochemistry / FEBS 41 (1): 197–202. PMID 4593336. edit
- ^ Rubin, G.; Hogness, D. (1975). "Effect of heat shock on the synthesis of low molecular weight RNAs in drosophilia: Accumulation of a novel form of 5S RNA". Cell 6 (2): 207–213. doi:10.1016/0092-8674(75)90011-2. PMID 810246. edit
- ^ Adams, M.; Celniker, S.; Holt, R.; Evans, C.; Gocayne, J.; Amanatides, P.; Scherer, S.; Li, P. et al. (2000). "The genome sequence of Drosophila melanogaster". Science 287 (5461): 2185–2195. Bibcode 2000Sci...287.2185.. doi:10.1126/science.287.5461.2185. PMID 10731132. edit
- ^ Robert Sanders, "UC Berkeley's Gerald Rubin shares AAAS prize with Celera's Craig Venter for sequencing genome of the fruit fly", UC Berkeley Campus News, Feb. 20, 2001.
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